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Si037967m Si037967m Si037973m Si037973m Si019588m Si019588m Si037849m Si037849m Si031480m Si031480m Si009351m Si009351m Si006665m Si006665m Si009301m Si009301m Si039628m Si039628m Si023045m Si023045m Si030902m Si030902m
"Si006665m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si006665mUncharacterized protein (379 aa)    
Predicted Functional Partners:
Si009301m
Uncharacterized protein (922 aa)
     
 
  0.932
Si039628m
Histone H2A (359 aa)
     
 
  0.928
Si037967m
Histone H2A (138 aa)
       
 
  0.893
Si019588m
Histone H2A (132 aa)
       
 
  0.893
Si030902m
40S ribosomal protein S6 (251 aa)
     
 
  0.860
Si023045m
40S ribosomal protein S6 (251 aa)
     
 
  0.860
Si009351m
Uncharacterized protein (838 aa)
     
      0.831
Si037973m
Histone H2A (136 aa)
       
 
  0.824
Si037849m
Histone H2A (159 aa)
       
 
  0.824
Si031480m
Histone H2A (135 aa)
       
 
  0.824
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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