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Si028767m Si028767m Si035181m Si035181m Si006268m Si006268m Si029064m Si029064m Si016986m Si016986m Si006841m Si006841m Si006632m Si006632m Si021935m Si021935m Si001074m Si001074m Si016655m Si016655m Si004950m Si004950m
"Si006841m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si006841mUncharacterized protein (337 aa)    
Predicted Functional Partners:
Si028767m
Uncharacterized protein (1085 aa)
     
   
  0.688
Si021935m
Uncharacterized protein (475 aa)
       
      0.554
Si035181m
Uncharacterized protein (522 aa)
       
      0.551
Si029064m
Uncharacterized protein (724 aa)
       
      0.551
Si004950m
Uncharacterized protein (519 aa)
       
      0.551
Si006632m
Phosphotyrosyl phosphatase activator ; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (389 aa)
       
 
  0.532
Si016986m
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (501 aa)
     
 
  0.528
Si016655m
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (622 aa)
     
 
  0.528
Si006268m
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (511 aa)
     
 
  0.528
Si001074m
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (514 aa)
     
 
  0.528
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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