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Si035794m Si035794m Si030478m Si030478m Si031053m Si031053m Si037045m Si037045m Si034525m Si034525m Si001402m Si001402m Si006975m Si006975m Si000404m Si000404m Si025305m Si025305m Si021157m Si021157m Si022924m Si022924m
"Si006975m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si006975mUncharacterized protein (303 aa)    
Predicted Functional Partners:
Si031053m
Uncharacterized protein (221 aa)
           
  0.678
Si030478m
Uncharacterized protein (330 aa)
           
  0.678
Si021157m
Auxin response factor ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (897 aa)
           
  0.678
Si001402m
Hexosyltransferase (453 aa)
           
  0.678
Si000404m
Uncharacterized protein (767 aa)
           
  0.678
Si022924m
Uncharacterized protein (277 aa)
       
   
0.533
Si037045m
Uncharacterized protein (266 aa)
           
  0.484
Si035794m
Uncharacterized protein (432 aa)
           
  0.457
Si034525m
Auxin response factor ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (684 aa)
           
  0.457
Si025305m
Uncharacterized protein (562 aa)
           
  0.457
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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