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Si016582m Si016582m Si028846m Si028846m Si034105m Si034105m Si006978m Si006978m Si005756m Si005756m Si022283m Si022283m Si002045m Si002045m Si001954m Si001954m
"Si006978m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si006978mUncharacterized protein (303 aa)    
Predicted Functional Partners:
Si016582m
Uncharacterized protein (665 aa)
           
  0.493
Si005756m
Uncharacterized protein (1048 aa)
           
  0.468
Si028846m
Uncharacterized protein (938 aa)
           
  0.429
Si022283m
Uncharacterized protein (391 aa)
     
   
  0.420
Si002045m
Uncharacterized protein (349 aa)
     
   
  0.420
Si034105m
Uncharacterized protein (955 aa)
           
  0.412
Si001954m
Uncharacterized protein (364 aa)
           
  0.408
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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