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Si035612m Si035612m Si001682m Si001682m Si027926m Si027926m Si014739m Si014739m Si021144m Si021144m Si001632m Si001632m Si007000m Si007000m Si017348m Si017348m Si001664m Si001664m Si009399m Si009399m Si000232m Si000232m
"Si007000m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si007000mUncharacterized protein (299 aa)    
Predicted Functional Partners:
Si021144m
Uncharacterized protein (913 aa)
     
   
  0.530
Si000232m
Uncharacterized protein (914 aa)
     
   
  0.530
Si035612m
Uncharacterized protein (457 aa)
           
  0.420
Si017348m
Uncharacterized protein (414 aa)
           
  0.420
Si001682m
Uncharacterized protein (406 aa)
           
  0.420
Si001664m
Uncharacterized protein (408 aa)
           
  0.420
Si027926m
Uncharacterized protein (783 aa)
           
  0.418
Si014739m
Uncharacterized protein (90 aa)
           
  0.418
Si009399m
Uncharacterized protein (787 aa)
           
  0.418
Si001632m
Uncharacterized protein (414 aa)
           
  0.418
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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