Full Link:
STRINGSTRING
Si034196m Si034196m Si037195m Si037195m Si037323m Si037323m Si002174m Si002174m Si007114m Si007114m Si030702m Si030702m Si020864m Si020864m Si003335m Si003335m Si023619m Si023619m psbI psbI Si031565m Si031565m
"Si007114m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si007114mUncharacterized protein (260 aa)    
Predicted Functional Partners:
Si037195m
Uncharacterized protein (246 aa)
   
 
  0.920
Si023619m
Uncharacterized protein (133 aa)
     
  0.919
Si003335m
Uncharacterized protein (130 aa)
     
  0.886
Si020864m
Annotation not available (83 aa)
       
  0.881
psbI
Photosystem II protein I; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water-plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation (36 aa)
       
  0.840
Si034196m
Uncharacterized protein (872 aa)
       
      0.824
Si002174m
Uncharacterized protein (333 aa)
   
 
  0.799
Si030702m
Uncharacterized protein (290 aa)
     
    0.784
Si037323m
Uncharacterized protein (231 aa)
     
   
  0.743
Si031565m
Uncharacterized protein (113 aa)
     
 
  0.737
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
Server load: low (2%)