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Si035599m Si035599m Si016066m Si016066m Si001134m Si001134m Si016114m Si016114m Si000356m Si000356m Si021708m Si021708m Si007167m Si007167m Si001189m Si001189m Si010889m Si010889m Si036950m Si036950m Si009169m Si009169m
"Si007167m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si007167mUncharacterized protein (246 aa)    
Predicted Functional Partners:
Si016066m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (2050 aa)
       
  0.803
Si009169m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1546 aa)
       
  0.803
Si001134m
Uncharacterized protein (503 aa)
       
    0.777
Si036950m
Uncharacterized protein (279 aa)
       
  0.757
Si016114m
Uncharacterized protein (1278 aa)
     
    0.730
Si000356m
Uncharacterized protein (796 aa)
       
    0.722
Si001189m
Uncharacterized protein (492 aa)
     
  0.706
Si035599m
Uncharacterized protein (459 aa)
       
  0.696
Si010889m
Uncharacterized protein (257 aa)
       
  0.696
Si021708m
Uncharacterized protein (536 aa)
         
  0.661
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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