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Si035811m Si035811m Si004406m Si004406m Si029236m Si029236m Si033972m Si033972m Si034926m Si034926m Si007249m Si007249m Si029435m Si029435m Si002806m Si002806m Si002795m Si002795m Si009160m Si009160m Si021323m Si021323m
"Si007249m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si007249mUncharacterized protein (220 aa)    
Predicted Functional Partners:
Si004406m
KRR-R motif-containing protein 1 ; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (415 aa)
     
    0.954
Si035811m
Uncharacterized protein (428 aa)
     
      0.879
Si021323m
Uncharacterized protein (733 aa)
     
      0.879
Si009160m
Uncharacterized protein (2111 aa)
     
    0.872
Si033972m
Uncharacterized protein (1165 aa)
     
 
  0.860
Si002806m
Uncharacterized protein (227 aa)
     
    0.860
Si002795m
U3 small nucleolar RNA-associated protein 11 ; Involved in nucleolar processing of pre-18S ribosomal RNA (229 aa)
     
 
    0.858
Si029435m
Uncharacterized protein (540 aa)
     
 
    0.847
Si029236m
Uncharacterized protein (616 aa)
     
 
  0.829
Si034926m
Uncharacterized protein (567 aa)
   
    0.826
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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