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Si007203m Si007203m Si031051m Si031051m Si019773m Si019773m Si024595m Si024595m Si007252m Si007252m Si030648m Si030648m Si029424m Si029424m Si008450m Si008450m Si037632m Si037632m Si000006m Si000006m Si020943m Si020943m
"Si007252m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si007252mUncharacterized protein (219 aa)    
Predicted Functional Partners:
Si019773m
Uncharacterized protein (256 aa)
 
 
0.885
Si029424m
Thioredoxin reductase (544 aa)
   
 
  0.759
Si031051m
Uncharacterized protein (221 aa)
 
 
0.680
Si037632m
Uncharacterized protein (192 aa)
   
   
  0.658
Si024595m
Uncharacterized protein (228 aa)
     
        0.628
Si008450m
Uncharacterized protein (218 aa)
     
        0.628
Si007203m
Uncharacterized protein (233 aa)
     
        0.628
Si020943m
Uncharacterized protein (2158 aa)
   
   
  0.615
Si000006m
Uncharacterized protein (2163 aa)
   
   
  0.615
Si030648m
Uncharacterized protein (301 aa)
     
 
  0.592
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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