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Si010907m Si010907m Si018551m Si018551m Si018294m Si018294m Si032841m Si032841m Si031449m Si031449m Si038809m Si038809m Si007358m Si007358m Si003209m Si003209m Si011017m Si011017m Si015190m Si015190m Si011215m Si011215m
"Si007358m" - 40S ribosomal protein S24 in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si007358m40S ribosomal protein S24 (180 aa)    
Predicted Functional Partners:
Si032841m
Uncharacterized protein (136 aa)
   
  0.999
Si031449m
Uncharacterized protein (141 aa)
   
  0.999
Si015190m
Uncharacterized protein (159 aa)
     
  0.999
Si003209m
Uncharacterized protein (155 aa)
   
  0.998
Si011215m
Uncharacterized protein (160 aa)
   
  0.998
Si010907m
Uncharacterized protein (252 aa)
   
  0.998
Si018551m
Uncharacterized protein (160 aa)
   
  0.998
Si018294m
40S ribosomal protein S8 (221 aa)
     
  0.998
Si011017m
40S ribosomal protein S8 (221 aa)
     
  0.998
Si038809m
Uncharacterized protein (183 aa)
   
  0.998
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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