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Si031392m Si031392m Si037339m Si037339m Si016141m Si016141m Si038053m Si038053m Si022890m Si022890m Si033113m Si033113m Si031842m Si031842m Si027786m Si027786m Si007449m Si007449m Si031148m Si031148m Si011406m Si011406m
"Si007449m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si007449mUncharacterized protein (144 aa)    
Predicted Functional Partners:
Si027786m
Uncharacterized protein (169 aa)
     
  0.995
Si011406m
Uncharacterized protein (107 aa)
     
  0.995
Si031392m
Uncharacterized protein (150 aa)
     
  0.994
Si038053m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (123 aa)
     
  0.994
Si031148m
Uncharacterized protein (200 aa)
     
  0.993
Si033113m
Uncharacterized protein (230 aa)
     
  0.993
Si016141m
DNA-directed RNA polymerase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1154 aa)
     
  0.992
Si022890m
Uncharacterized protein (283 aa)
     
  0.992
Si031842m
Uncharacterized protein (52 aa)
     
  0.992
Si037339m
Uncharacterized protein (230 aa)
     
  0.992
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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