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Si013224m Si013224m Si026631m Si026631m Si036658m Si036658m Si019646m Si019646m Si016274m Si016274m Si012495m Si012495m Si007890m Si007890m Si014110m Si014110m
"Si007890m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si007890mUncharacterized protein (367 aa)    
Predicted Functional Partners:
Si012495m
Uncharacterized protein (235 aa)
   
          0.522
Si014110m
Uncharacterized protein (318 aa)
   
          0.516
Si026631m
Uncharacterized protein (324 aa)
   
          0.514
Si036658m
Uncharacterized protein (321 aa)
   
          0.490
Si019646m
Uncharacterized protein (922 aa)
     
   
  0.487
Si016274m
Nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (889 aa)
     
   
  0.487
Si013224m
Nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
     
   
  0.487
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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