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Si006854m Si006854m Si002049m Si002049m Si019646m Si019646m Si013224m Si013224m Si014110m Si014110m Si016274m Si016274m Si026631m Si026631m Si008092m Si008092m Si007909m Si007909m Si006971m Si006971m Si007954m Si007954m
"Si007909m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si007909mUncharacterized protein (327 aa)    
Predicted Functional Partners:
Si006971m
Uncharacterized protein (304 aa)
   
          0.506
Si014110m
Uncharacterized protein (318 aa)
   
          0.491
Si019646m
Uncharacterized protein (922 aa)
     
   
  0.487
Si016274m
Nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (889 aa)
     
   
  0.487
Si013224m
Nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
     
   
  0.487
Si002049m
Uncharacterized protein (348 aa)
   
          0.484
Si008092m
Uncharacterized protein (338 aa)
   
          0.482
Si026631m
Uncharacterized protein (324 aa)
   
          0.480
Si007954m
Uncharacterized protein (330 aa)
   
          0.447
Si006854m
Uncharacterized protein (334 aa)
   
          0.439
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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