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Si037391m Si037391m Si031041m Si031041m Si007306m Si007306m Si002796m Si002796m Si001506m Si001506m Si037480m Si037480m Si023148m Si023148m Si008265m Si008265m Si031642m Si031642m Si040283m Si040283m Si026828m Si026828m
"Si008265m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si008265mUncharacterized protein (765 aa)    
Predicted Functional Partners:
Si007306m
Uncharacterized protein (204 aa)
     
 
  0.920
Si001506m
Uncharacterized protein (435 aa)
     
 
  0.892
Si023148m
Uncharacterized protein (228 aa)
     
 
  0.777
Si002796m
Uncharacterized protein (229 aa)
     
 
  0.777
Si037480m
Uncharacterized protein (212 aa)
     
 
  0.664
Si037391m
Uncharacterized protein (225 aa)
     
 
  0.664
Si031041m
Uncharacterized protein (223 aa)
     
 
  0.664
Si026828m
Uncharacterized protein (225 aa)
     
 
  0.664
Si040283m
Uncharacterized protein (345 aa)
       
      0.621
Si031642m
Uncharacterized protein (94 aa)
     
 
  0.604
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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