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Si028903m Si028903m Si029154m Si029154m Si034211m Si034211m Si016166m Si016166m Si009607m Si009607m Si008400m Si008400m Si025849m Si025849m Si009829m Si009829m Si020943m Si020943m Si028677m Si028677m Si000006m Si000006m
"Si008400m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si008400mUncharacterized protein (286 aa)    
Predicted Functional Partners:
Si020943m
Uncharacterized protein (2158 aa)
     
 
  0.947
Si000006m
Uncharacterized protein (2163 aa)
     
 
  0.947
Si028677m
Uncharacterized protein (1497 aa)
     
 
  0.901
Si009829m
Uncharacterized protein (523 aa)
   
 
  0.868
Si016166m
Uncharacterized protein (1081 aa)
   
  0.617
Si009607m
Glycerol-3-phosphate dehydrogenase (629 aa)
   
   
  0.586
Si025849m
Uncharacterized protein (1097 aa)
   
 
  0.498
Si034211m
Uncharacterized protein (865 aa)
       
 
  0.496
Si029154m
Uncharacterized protein (662 aa)
       
 
  0.496
Si028903m
Uncharacterized protein (864 aa)
       
 
  0.496
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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