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Si031664m Si031664m Si028707m Si028707m Si033947m Si033947m Si014752m Si014752m Si016127m Si016127m Si016114m Si016114m Si033952m Si033952m Si008667m Si008667m Si000177m Si000177m
"Si008667m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si008667mUncharacterized protein (181 aa)    
Predicted Functional Partners:
Si016114m
Uncharacterized protein (1278 aa)
       
      0.957
Si031664m
Uncharacterized protein (89 aa)
       
      0.930
Si014752m
Uncharacterized protein (87 aa)
       
      0.930
Si033947m
Uncharacterized protein (1230 aa)
       
      0.884
Si028707m
Uncharacterized protein (1303 aa)
       
      0.884
Si016127m
Uncharacterized protein (1230 aa)
       
      0.884
Si033952m
Coatomer subunit alpha ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network (1219 aa)
       
      0.554
Si000177m
Uncharacterized protein (984 aa)
       
      0.554
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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