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Si005610m Si005610m Si034255m Si034255m Si034256m Si034256m Si035798m Si035798m Si001403m Si001403m Si030048m Si030048m Si028960m Si028960m Si009161m Si009161m Si000122m Si000122m Si016034m Si016034m Si020953m Si020953m
"Si009161m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si009161mUncharacterized protein (1893 aa)    
Predicted Functional Partners:
Si034256m
Uncharacterized protein (836 aa)
     
  0.827
Si034255m
Uncharacterized protein (838 aa)
     
  0.827
Si028960m
Uncharacterized protein (806 aa)
     
  0.827
Si016034m
Uncharacterized protein (101 aa)
     
  0.827
Si005610m
Uncharacterized protein (124 aa)
     
  0.827
Si000122m
Uncharacterized protein (1107 aa)
     
  0.827
Si035798m
Uncharacterized protein (431 aa)
       
  0.714
Si030048m
Uncharacterized protein (403 aa)
       
  0.714
Si001403m
Uncharacterized protein (453 aa)
       
  0.714
Si020953m
Uncharacterized protein (1741 aa)
     
      0.592
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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