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TOP6A TOP6A Si036131m Si036131m Si009193m Si009193m Si013908m Si013908m Si029544m Si029544m Si038664m Si038664m Si032500m Si032500m
"Si009193m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si009193mUncharacterized protein (1292 aa)    
Predicted Functional Partners:
Si036131m
Uncharacterized protein (383 aa)
       
 
  0.822
Si013908m
Uncharacterized protein (386 aa)
       
 
  0.627
TOP6A
DNA topoisomerase 6 subunit A ; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity (438 aa)
       
 
  0.506
Si032500m
Uncharacterized protein (338 aa)
           
  0.485
Si038664m
Uncharacterized protein (582 aa)
     
   
  0.463
Si029544m
Uncharacterized protein (511 aa)
           
  0.407
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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