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Si005708m Si005708m Si023427m Si023427m Si023320m Si023320m Si031208m Si031208m Si018666m Si018666m Si007486m Si007486m Si009207m Si009207m Si034383m Si034383m Si009250m Si009250m Si025854m Si025854m Si002038m Si002038m
"Si009207m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si009207mUncharacterized protein (1185 aa)    
Predicted Functional Partners:
Si005708m
Uncharacterized protein (1240 aa)
     
  0.836
Si031208m
Uncharacterized protein (187 aa)
       
  0.775
Si023320m
Uncharacterized protein (194 aa)
       
  0.615
Si023427m
Uncharacterized protein (175 aa)
       
  0.606
Si018666m
Uncharacterized protein (135 aa)
       
  0.577
Si007486m
Uncharacterized protein (135 aa)
       
  0.577
Si009250m
Uncharacterized protein (1010 aa)
     
 
    0.569
Si025854m
Uncharacterized protein (1085 aa)
     
 
    0.554
Si034383m
Uncharacterized protein (753 aa)
     
 
    0.540
Si002038m
Uncharacterized protein (350 aa)
     
 
    0.540
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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