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Si033853m Si033853m Si009168m Si009168m Si009219m Si009219m Si034205m Si034205m Si021039m Si021039m Si039134m Si039134m Si033906m Si033906m Si009227m Si009227m Si000027m Si000027m Si009649m Si009649m Si013251m Si013251m
"Si009219m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si009219mUncharacterized protein (1130 aa)    
Predicted Functional Partners:
Si039134m
Uncharacterized protein (1593 aa)
     
 
  0.844
Si033906m
Uncharacterized protein (1386 aa)
     
 
  0.844
Si000027m
Uncharacterized protein (1623 aa)
     
 
  0.844
Si033853m
Uncharacterized protein (1933 aa)
     
 
  0.831
Si009649m
Uncharacterized protein (599 aa)
     
 
  0.730
Si009168m
Uncharacterized protein (1558 aa)
     
 
  0.690
Si034205m
Uncharacterized protein (870 aa)
     
 
  0.627
Si013251m
Uncharacterized protein (848 aa)
     
 
  0.627
Si021039m
Uncharacterized protein (1102 aa)
     
   
  0.595
Si009227m
Uncharacterized protein (1083 aa)
     
   
  0.595
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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