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Si036690m Si036690m Si009231m Si009231m Si032841m Si032841m Si037316m Si037316m Si003225m Si003225m Si040188m Si040188m Si031505m Si031505m Si031387m Si031387m Si003209m Si003209m Si031449m Si031449m Si031459m Si031459m
"Si009231m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si009231mUncharacterized protein (1053 aa)    
Predicted Functional Partners:
Si032841m
Uncharacterized protein (136 aa)
     
  0.968
Si031449m
Uncharacterized protein (141 aa)
     
  0.968
Si040188m
Uncharacterized protein (162 aa)
     
  0.931
Si003209m
Uncharacterized protein (155 aa)
     
  0.931
Si031387m
Uncharacterized protein (152 aa)
     
  0.891
Si003225m
Uncharacterized protein (152 aa)
     
  0.891
Si036690m
Autophagy-related protein 3 (316 aa)
     
  0.888
Si037316m
Uncharacterized protein (232 aa)
       
  0.879
Si031505m
Uncharacterized protein (129 aa)
       
  0.879
Si031459m
Uncharacterized protein (140 aa)
       
  0.879
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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