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Si033853m Si033853m Si033906m Si033906m Si039134m Si039134m Si000027m Si000027m Si008793m Si008793m Si009246m Si009246m Si024033m Si024033m Si017805m Si017805m Si029150m Si029150m Si009571m Si009571m Si016525m Si016525m
"Si009246m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si009246mUncharacterized protein (1021 aa)    
Predicted Functional Partners:
Si029150m
Polyadenylate-binding protein ; Binds the poly(A) tail of mRNA (664 aa)
       
  0.640
Si024033m
Uncharacterized protein (703 aa)
       
  0.640
Si009571m
Polyadenylate-binding protein ; Binds the poly(A) tail of mRNA (657 aa)
       
  0.640
Si008793m
Uncharacterized protein (590 aa)
       
  0.640
Si039134m
Uncharacterized protein (1593 aa)
     
 
  0.557
Si033906m
Uncharacterized protein (1386 aa)
     
 
  0.557
Si033853m
Uncharacterized protein (1933 aa)
     
 
  0.557
Si000027m
Uncharacterized protein (1623 aa)
     
 
  0.557
Si017805m
Uncharacterized protein (322 aa)
         
  0.472
Si016525m
Uncharacterized protein (689 aa)
       
  0.460
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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