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Si022917m Si022917m Si016810m Si016810m Si025152m Si025152m Si014243m Si014243m Si009349m Si009349m Si007611m Si007611m Si031539m Si031539m Si038674m Si038674m Si011347m Si011347m Si006148m Si006148m Si014669m Si014669m
"Si009349m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si009349mUncharacterized protein (840 aa)    
Predicted Functional Partners:
Si031539m
Autophagy-related protein (119 aa)
     
  0.960
Si014669m
Autophagy-related protein (119 aa)
     
  0.960
Si011347m
Autophagy-related protein (121 aa)
     
  0.960
Si007611m
Autophagy-related protein (101 aa)
     
  0.960
Si022917m
Uncharacterized protein (278 aa)
       
  0.959
Si014243m
Uncharacterized protein (275 aa)
       
  0.959
Si025152m
Uncharacterized protein (566 aa)
     
  0.788
Si016810m
Uncharacterized protein (554 aa)
     
  0.788
Si006148m
Uncharacterized protein (571 aa)
     
  0.788
Si038674m
Uncharacterized protein (509 aa)
       
  0.781
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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