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STRINGSTRING
Si017892m Si017892m Si036763m Si036763m Si036703m Si036703m Si030389m Si030389m Si036078m Si036078m Si036884m Si036884m Si034069m Si034069m Si009393m Si009393m Si006958m Si006958m Si021021m Si021021m Si021168m Si021168m
"Si009393m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si009393mUncharacterized protein (796 aa)    
Predicted Functional Partners:
Si036763m
Serine/threonine-protein phosphatase (307 aa)
       
  0.933
Si036703m
Serine/threonine-protein phosphatase (315 aa)
       
  0.933
Si036078m
Serine/threonine-protein phosphatase (390 aa)
       
  0.933
Si017892m
Serine/threonine-protein phosphatase (306 aa)
       
  0.933
Si006958m
Serine/threonine-protein phosphatase (306 aa)
       
  0.933
Si036884m
Uncharacterized protein (290 aa)
       
 
  0.885
Si034069m
Serine/threonine-protein phosphatase (998 aa)
     
  0.806
Si021168m
Serine/threonine-protein phosphatase (887 aa)
     
  0.806
Si021021m
Serine/threonine-protein phosphatase (1161 aa)
     
  0.806
Si030389m
Serine/threonine-protein phosphatase (344 aa)
       
  0.694
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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