Full Link:
STRINGSTRING
Si020984m Si020984m Si025849m Si025849m Si020943m Si020943m Si029424m Si029424m Si009637m Si009637m Si000064m Si000064m Si033837m Si033837m Si001296m Si001296m Si000006m Si000006m Si016091m Si016091m Si009759m Si009759m
"Si009637m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si009637mUncharacterized protein (606 aa)    
Predicted Functional Partners:
Si020943m
Uncharacterized protein (2158 aa)
   
   
  0.544
Si000006m
Uncharacterized protein (2163 aa)
   
   
  0.544
Si029424m
Thioredoxin reductase (544 aa)
   
 
  0.533
Si001296m
Uncharacterized protein (472 aa)
         
  0.522
Si016091m
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1480 aa)
         
  0.476
Si020984m
Uncharacterized protein (1322 aa)
     
   
  0.468
Si000064m
Uncharacterized protein (1324 aa)
     
   
  0.468
Si009759m
Uncharacterized protein (546 aa)
   
   
  0.461
Si025849m
Uncharacterized protein (1097 aa)
   
 
  0.444
Si033837m
Uncharacterized protein (2266 aa)
   
   
  0.433
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
Server load: low (1%)