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Si038799m Si038799m Si032233m Si032233m Si039483m Si039483m Si038685m Si038685m Si035806m Si035806m Si009724m Si009724m Si001228m Si001228m Si003853m Si003853m Si009643m Si009643m Si021587m Si021587m Si006550m Si006550m
"Si009724m" - Pectinesterase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si009724mPectinesterase (563 aa)    
Predicted Functional Partners:
Si001228m
Uncharacterized protein (486 aa)
   
 
  0.475
Si038685m
Uncharacterized protein (396 aa)
   
 
  0.475
Si003853m
Uncharacterized protein (415 aa)
   
 
  0.475
Si021587m
Uncharacterized protein (580 aa)
           
  0.463
Si009643m
Uncharacterized protein (604 aa)
           
  0.463
Si006550m
Uncharacterized protein (413 aa)
           
  0.463
Si039483m
Uncharacterized protein (430 aa)
   
 
  0.462
Si038799m
Uncharacterized protein (378 aa)
   
 
  0.462
Si035806m
Uncharacterized protein (429 aa)
   
 
  0.462
Si032233m
Uncharacterized protein (417 aa)
   
 
  0.462
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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