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Si034881m Si034881m Si013356m Si013356m Si034781m Si034781m Si034436m Si034436m Si034681m Si034681m Si034692m Si034692m Si009993m Si009993m Si006089m Si006089m Si029885m Si029885m Si029128m Si029128m Si022362m Si022362m
"Si009993m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si009993mUncharacterized protein (478 aa)    
Predicted Functional Partners:
Si029128m
Ribosome biogenesis protein BOP1 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (680 aa)
     
 
  0.982
Si013356m
Ribosome biogenesis protein BOP1 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (681 aa)
     
 
  0.982
Si034681m
Uncharacterized protein (629 aa)
     
      0.982
Si034436m
Uncharacterized protein (725 aa)
     
      0.981
Si006089m
Uncharacterized protein (616 aa)
     
      0.981
Si034692m
Pescadillo homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (626 aa)
     
 
  0.978
Si034881m
Uncharacterized protein (578 aa)
     
   
  0.975
Si034781m
Uncharacterized protein (602 aa)
     
   
  0.975
Si022362m
Uncharacterized protein (379 aa)
     
   
  0.975
Si029885m
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (435 aa)
     
   
  0.973
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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