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Si038674m Si038674m Si036622m Si036622m Si022390m Si022390m Si036253m Si036253m Si003209m Si003209m Si032841m Si032841m Si037173m Si037173m Si031449m Si031449m Si010008m Si010008m Si032257m Si032257m Si032632m Si032632m
"Si010008m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si010008mUncharacterized protein (474 aa)    
Predicted Functional Partners:
Si032841m
Uncharacterized protein (136 aa)
       
    0.546
Si031449m
Uncharacterized protein (141 aa)
       
    0.546
Si003209m
Uncharacterized protein (155 aa)
       
    0.533
Si037173m
Derlin ; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (249 aa)
     
  0.483
Si022390m
Derlin ; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (372 aa)
     
  0.483
Si036253m
Uncharacterized protein (371 aa)
       
  0.450
Si038674m
Uncharacterized protein (509 aa)
       
    0.436
Si036622m
Uncharacterized protein (325 aa)
       
    0.436
Si032632m
Uncharacterized protein (193 aa)
       
    0.436
Si032257m
Uncharacterized protein (255 aa)
       
    0.436
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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