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Si036697m Si036697m Si029885m Si029885m Si034284m Si034284m Si034785m Si034785m Si036877m Si036877m Si009327m Si009327m Si010020m Si010020m Si008685m Si008685m Si022135m Si022135m Si010555m Si010555m Si022093m Si022093m
"Si010020m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si010020mUncharacterized protein (471 aa)    
Predicted Functional Partners:
Si010555m
Uncharacterized protein (334 aa)
     
  0.994
Si029885m
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (435 aa)
     
        0.962
Si022093m
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (435 aa)
     
        0.962
Si034785m
Uncharacterized protein (601 aa)
     
   
  0.857
Si022135m
Uncharacterized protein (425 aa)
     
   
  0.857
Si008685m
Uncharacterized protein (501 aa)
     
   
  0.857
Si036877m
Uncharacterized protein (291 aa)
     
        0.830
Si036697m
Uncharacterized protein (315 aa)
     
        0.830
Si034284m
Uncharacterized protein (815 aa)
     
        0.830
Si009327m
Uncharacterized protein (883 aa)
     
        0.830
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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