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Si024695m Si024695m Si008781m Si008781m Si029311m Si029311m Si001028m Si001028m Si021738m Si021738m Si034794m Si034794m Si010200m Si010200m Si002491m Si002491m Si021693m Si021693m Si024048m Si024048m Si024596m Si024596m
"Si010200m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si010200mUncharacterized protein (422 aa)    
Predicted Functional Partners:
Si029311m
Beta-hexosaminidase (585 aa)
   
 
  0.678
Si034794m
Beta-hexosaminidase (598 aa)
   
 
  0.677
Si021693m
Beta-hexosaminidase (541 aa)
   
 
  0.670
Si021738m
Beta-hexosaminidase (528 aa)
   
 
  0.665
Si024695m
Beta-hexosaminidase (519 aa)
   
 
  0.662
Si001028m
Beta-hexosaminidase (521 aa)
   
 
  0.662
Si024596m
Uncharacterized protein (391 aa)
 
   
  0.508
Si024048m
Uncharacterized protein (280 aa)
 
   
  0.500
Si002491m
Uncharacterized protein (282 aa)
 
   
  0.499
Si008781m
Uncharacterized protein (339 aa)
 
   
  0.499
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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