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Si027662m Si027662m Si036658m Si036658m Si016274m Si016274m Si012411m Si012411m Si019646m Si019646m Si013224m Si013224m Si026631m Si026631m Si010340m Si010340m Si014110m Si014110m Si007954m Si007954m
"Si010340m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si010340mUncharacterized protein (382 aa)    
Predicted Functional Partners:
Si026631m
Uncharacterized protein (324 aa)
   
          0.513
Si014110m
Uncharacterized protein (318 aa)
   
          0.510
Si019646m
Uncharacterized protein (922 aa)
     
   
  0.487
Si016274m
Nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (889 aa)
     
   
  0.487
Si013224m
Nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
     
   
  0.487
Si027662m
Uncharacterized protein (332 aa)
   
          0.486
Si036658m
Uncharacterized protein (321 aa)
   
          0.461
Si007954m
Uncharacterized protein (330 aa)
   
          0.436
Si012411m
Uncharacterized protein (294 aa)
   
          0.421
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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