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Si020213m Si020213m Si037186m Si037186m Si000720m Si000720m Si030208m Si030208m Si006505m Si006505m Si018489m Si018489m actin actin Si039628m Si039628m Si035723m Si035723m Si016490m Si016490m Si017168m Si017168m
"actin" - Actin in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
actinActin (377 aa)    
Predicted Functional Partners:
Si039628m
Histone H2A (359 aa)
     
  0.947
Si017168m
Uncharacterized protein (456 aa)
     
  0.940
Si018489m
Arp2/3 complex 21 kDa subunit ; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks (174 aa)
     
  0.927
Si037186m
Uncharacterized protein (247 aa)
     
  0.922
Si035723m
Uncharacterized protein (443 aa)
       
0.908
Si020213m
Uncharacterized protein (673 aa)
     
  0.905
Si016490m
Uncharacterized protein (707 aa)
     
  0.905
Si000720m
Uncharacterized protein (612 aa)
     
  0.905
Si030208m
Uncharacterized protein ; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments (374 aa)
     
    0.900
Si006505m
Uncharacterized protein (425 aa)
     
0.891
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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