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Si001190m Si001190m Si033348m Si033348m Si028874m Si028874m Si023113m Si023113m Si034149m Si034149m Si026012m Si026012m Si003065m Si003065m Si010624m Si010624m Si001076m Si001076m Si009849m Si009849m Si011923m Si011923m
"Si010624m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si010624mUncharacterized protein (318 aa)    
Predicted Functional Partners:
Si011923m
Uncharacterized protein (479 aa)
     
 
    0.476
Si009849m
Uncharacterized protein (518 aa)
     
 
    0.476
Si001190m
Uncharacterized protein (492 aa)
     
 
    0.476
Si001076m
Uncharacterized protein (513 aa)
     
 
    0.476
Si033348m
Uncharacterized protein (159 aa)
     
 
    0.463
Si023113m
Uncharacterized protein (237 aa)
     
 
    0.463
Si003065m
Uncharacterized protein (182 aa)
     
 
    0.463
Si026012m
Uncharacterized protein (758 aa)
     
    0.459
Si034149m
Coatomer subunit gamma ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (899 aa)
     
 
    0.457
Si028874m
Coatomer subunit gamma ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (888 aa)
     
 
    0.457
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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