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Si034086m Si034086m Si039574m Si039574m Si016606m Si016606m Si027479m Si027479m Si021813m Si021813m Si010708m Si010708m Si025977m Si025977m Si021144m Si021144m Si016611m Si016611m Si000704m Si000704m Si021139m Si021139m
"Si010708m" - ATP-dependent Clp protease proteolytic subunit in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si010708mATP-dependent Clp protease proteolytic subunit (298 aa)    
Predicted Functional Partners:
Si000704m
Uncharacterized protein (618 aa)
 
  0.945
Si016606m
Uncharacterized protein (647 aa)
 
  0.945
Si016611m
Uncharacterized protein (644 aa)
 
  0.945
Si021813m
Uncharacterized protein (506 aa)
 
  0.945
Si039574m
Uncharacterized protein (279 aa)
   
 
  0.764
Si034086m
Uncharacterized protein (977 aa)
   
 
  0.764
Si027479m
Uncharacterized protein (1126 aa)
   
 
  0.764
Si025977m
Uncharacterized protein (838 aa)
   
 
  0.764
Si021144m
Uncharacterized protein (913 aa)
   
 
  0.764
Si021139m
Uncharacterized protein (921 aa)
   
 
  0.764
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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