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Si004525m Si004525m Si031449m Si031449m Si018593m Si018593m rpoA rpoA Si032841m Si032841m Si030996m Si030996m Si003072m Si003072m Si002374m Si002374m Si011236m Si011236m Si011152m Si011152m Si010932m Si010932m
"Si010932m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si010932mUncharacterized protein (244 aa)    
Predicted Functional Partners:
rpoA
RNA polymerase alpha subunit (261 aa)
   
  0.999
Si032841m
Uncharacterized protein (136 aa)
     
  0.998
Si031449m
Uncharacterized protein (141 aa)
     
  0.998
Si004525m
Uncharacterized protein (298 aa)
   
  0.998
Si002374m
Uncharacterized protein (303 aa)
   
  0.998
Si011152m
Uncharacterized protein (180 aa)
   
  0.998
Si003072m
Uncharacterized protein (181 aa)
   
  0.998
Si018593m
Uncharacterized protein (151 aa)
   
  0.998
Si011236m
Uncharacterized protein (152 aa)
   
  0.998
Si030996m
Uncharacterized protein (232 aa)
   
  0.998
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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