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Si033137m Si033137m Si034045m Si034045m Si035133m Si035133m Si018850m Si018850m Si036690m Si036690m Si011037m Si011037m Si035298m Si035298m Si017586m Si017586m Si001044m Si001044m Si000183m Si000183m Si021915m Si021915m
"Si011037m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si011037mUncharacterized protein (216 aa)    
Predicted Functional Partners:
Si000183m
Uncharacterized protein (970 aa)
       
  0.992
Si001044m
Uncharacterized protein (518 aa)
       
  0.990
Si017586m
Autophagy protein 5 ; Required for autophagy (363 aa)
       
  0.958
Si018850m
Ubiquitin-like protein ATG12 ; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation (91 aa)
     
  0.870
Si036690m
Autophagy-related protein 3 (316 aa)
       
  0.827
Si021915m
Uncharacterized protein (480 aa)
       
 
  0.733
Si035298m
Uncharacterized protein (505 aa)
         
  0.652
Si035133m
NEDD8-activating enzyme E1 regulatory subunit ; Regulatory subunit of the dimeric ECR1-AXR1 E1 enzyme. E1 activates NEDD8/RUB1 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-ECR1 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of RCE1 (529 aa)
       
  0.631
Si034045m
Uncharacterized protein (1030 aa)
       
  0.631
Si033137m
Uncharacterized protein (332 aa)
       
  0.631
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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