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Si018870m Si018870m Si011415m Si011415m Si038000m Si038000m Si031706m Si031706m Si038321m Si038321m Si023742m Si023742m Si014971m Si014971m Si003449m Si003449m Si011381m Si011381m Si014746m Si014746m Si018851m Si018851m
"Si011381m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si011381mUncharacterized protein (115 aa)    
Predicted Functional Partners:
Si014746m
Uncharacterized protein (88 aa)
     
  0.999
Si018870m
Uncharacterized protein ; Probable common Sm protein, is found in U1 and U2 snRNPs and may be part of the spliceosome (86 aa)
     
  0.999
Si038321m
Uncharacterized protein (80 aa)
     
  0.999
Si023742m
Uncharacterized protein (104 aa)
     
  0.998
Si011415m
Uncharacterized protein (105 aa)
     
  0.998
Si003449m
Uncharacterized protein (104 aa)
     
  0.998
Si038000m
Uncharacterized protein (132 aa)
     
0.998
Si018851m
Uncharacterized protein ; Probable common Sm protein, is found in U1 and U2 snRNPs and may be part of the spliceosome (91 aa)
     
  0.998
Si031706m
Uncharacterized protein (81 aa)
     
  0.997
Si014971m
Uncharacterized protein (61 aa)
     
  0.994
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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