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Si011406m Si011406m Si031442m Si031442m Si022495m Si022495m Si027786m Si027786m Si031148m Si031148m Si037339m Si037339m Si009186m Si009186m Si001120m Si001120m Si018767m Si018767m Si016141m Si016141m Si011757m Si011757m
"Si011757m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si011757mUncharacterized protein (159 aa)    
Predicted Functional Partners:
Si001120m
Uncharacterized protein (506 aa)
     
  0.981
Si031148m
Uncharacterized protein (200 aa)
     
  0.980
Si018767m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (110 aa)
     
  0.977
Si016141m
DNA-directed RNA polymerase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1154 aa)
     
  0.977
Si022495m
Uncharacterized protein (353 aa)
     
  0.976
Si027786m
Uncharacterized protein (169 aa)
     
  0.971
Si011406m
Uncharacterized protein (107 aa)
     
  0.971
Si009186m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1394 aa)
     
  0.963
Si037339m
Uncharacterized protein (230 aa)
     
  0.961
Si031442m
Uncharacterized protein (143 aa)
     
  0.961
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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