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Si010658m Si010658m Si030524m Si030524m Si016336m Si016336m Si034298m Si034298m Si031093m Si031093m Si012059m Si012059m Si016091m Si016091m Si026404m Si026404m Si006186m Si006186m Si024745m Si024745m Si022666m Si022666m
"Si012059m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si012059mUncharacterized protein (284 aa)    
Predicted Functional Partners:
Si006186m
Uncharacterized protein (548 aa)
       
      0.686
Si034298m
Uncharacterized protein (807 aa)
              0.433
Si016336m
Uncharacterized protein (805 aa)
              0.433
Si016091m
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1480 aa)
         
  0.422
Si030524m
Uncharacterized protein (324 aa)
         
  0.401
Si010658m
Uncharacterized protein (310 aa)
         
  0.401
Si031093m
Uncharacterized protein (213 aa)
         
  0.401
Si026404m
Uncharacterized protein (429 aa)
         
  0.401
Si024745m
Uncharacterized protein (586 aa)
         
  0.401
Si022666m
Uncharacterized protein (324 aa)
         
  0.401
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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