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STRINGSTRING
Si026139m Si026139m Si036896m Si036896m Si012110m Si012110m Si000068m Si000068m Si009629m Si009629m Si002389m Si002389m Si020943m Si020943m Si000006m Si000006m
"Si012110m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si012110mUncharacterized protein (452 aa)    
Predicted Functional Partners:
Si020943m
Uncharacterized protein (2158 aa)
           
  0.463
Si000006m
Uncharacterized protein (2163 aa)
           
  0.463
Si036896m
Uncharacterized protein (288 aa)
   
     
  0.459
Si000068m
Uncharacterized protein (1290 aa)
              0.456
Si002389m
Uncharacterized protein (300 aa)
   
          0.443
Si026139m
Uncharacterized protein (597 aa)
   
        0.426
Si009629m
Uncharacterized protein (611 aa)
   
        0.418
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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