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Si036033m Si036033m Si012182m Si012182m Si036570m Si036570m Si029196m Si029196m Si033837m Si033837m Si021344m Si021344m Si029199m Si029199m ACC-R ACC-R Si016347m Si016347m Si000465m Si000465m Si016884m Si016884m
"Si012182m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si012182mUncharacterized protein (339 aa)    
Predicted Functional Partners:
Si021344m
Uncharacterized protein (719 aa)
       
  0.729
Si016347m
Uncharacterized protein (799 aa)
       
  0.729
Si000465m
Uncharacterized protein (723 aa)
       
  0.729
Si016884m
Aldehyde dehydrogenase (528 aa)
     
  0.675
Si036570m
Uncharacterized protein (330 aa)
   
   
  0.608
Si036033m
Uncharacterized protein (395 aa)
   
   
  0.601
Si029196m
Uncharacterized protein (634 aa)
   
 
0.600
Si029199m
Uncharacterized protein (633 aa)
   
 
0.600
Si033837m
Uncharacterized protein (2266 aa)
         
  0.534
ACC-R
Acetyl-coenzyme A carboxylase (2321 aa)
         
  0.534
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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