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Si020164m Si020164m Si037504m Si037504m Si030677m Si030677m Si006543m Si006543m Si012624m Si012624m ABH1 ABH1 Si017367m Si017367m Si017165m Si017165m Si037341m Si037341m Si002839m Si002839m Si016739m Si016739m
"Si012624m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si012624mUncharacterized protein (1486 aa)    
Predicted Functional Partners:
Si002839m
Uncharacterized protein (221 aa)
     
  0.992
Si017367m
Uncharacterized protein (410 aa)
     
  0.987
Si006543m
Uncharacterized protein (414 aa)
     
  0.987
Si037341m
Uncharacterized protein (230 aa)
     
  0.986
Si037504m
Uncharacterized protein (209 aa)
     
  0.962
Si030677m
Uncharacterized protein (296 aa)
     
  0.939
Si020164m
Uncharacterized protein (543 aa)
     
  0.939
Si017165m
Uncharacterized protein (456 aa)
     
  0.939
Si016739m
Uncharacterized protein (583 aa)
     
  0.939
ABH1
Nuclear cap-binding protein subunit 1 (887 aa)
       
  0.935
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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