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Si035908m Si035908m Si003557m Si003557m Si040033m Si040033m Si038247m Si038247m Si034989m Si034989m Si012639m Si012639m Si035308m Si035308m Si000763m Si000763m Si034935m Si034935m Si021342m Si021342m Si034703m Si034703m
"Si012639m" - Endoglucanase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si012639mEndoglucanase (516 aa)    
Predicted Functional Partners:
Si021342m
DNA helicase (720 aa)
       
      0.979
Si000763m
Uncharacterized protein (596 aa)
       
      0.979
Si003557m
Uncharacterized protein (85 aa)
       
      0.974
Si038247m
Cyclin-dependent kinases regulatory subunit ; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (90 aa)
       
      0.955
Si040033m
Uncharacterized protein (637 aa)
         
    0.900
Si035908m
Uncharacterized protein (411 aa)
         
    0.900
Si035308m
Uncharacterized protein (503 aa)
         
    0.900
Si034989m
Uncharacterized protein (556 aa)
         
    0.900
Si034935m
Uncharacterized protein (566 aa)
         
    0.900
Si034703m
Uncharacterized protein (622 aa)
         
    0.900
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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