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Si038247m Si038247m Si017283m Si017283m Si008087m Si008087m Si013108m Si013108m Si027629m Si027629m Si011852m Si011852m Si016350m Si016350m Si006474m Si006474m Si009312m Si009312m Si005911m Si005911m Si008671m Si008671m
"Si013108m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si013108mUncharacterized protein (373 aa)    
Predicted Functional Partners:
Si011852m
Uncharacterized protein (554 aa)
 
          0.950
Si038247m
Cyclin-dependent kinases regulatory subunit ; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (90 aa)
       
      0.863
Si016350m
Uncharacterized protein (797 aa)
   
 
  0.807
Si009312m
Uncharacterized protein (905 aa)
   
 
  0.807
Si008087m
Uncharacterized protein (692 aa)
   
 
  0.807
Si005911m
Uncharacterized protein (762 aa)
   
 
  0.807
Si027629m
Alpha-amylase (426 aa)
 
 
  0.731
Si017283m
Alpha-amylase (427 aa)
 
 
  0.730
Si006474m
Alpha-amylase (432 aa)
 
 
  0.726
Si008671m
Alpha-amylase (436 aa)
 
 
  0.723
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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