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Si004808m Si004808m Si031449m Si031449m Si032841m Si032841m Si037173m Si037173m Si036047m Si036047m Si013160m Si013160m Si022390m Si022390m Si001620m Si001620m Si018129m Si018129m Si030105m Si030105m Si009287m Si009287m
"Si013160m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si013160mUncharacterized protein (1093 aa)    
Predicted Functional Partners:
Si009287m
Uncharacterized protein (936 aa)
   
0.993
Si018129m
Uncharacterized protein (260 aa)
     
 
  0.861
Si036047m
Peroxin-12 ; Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes (393 aa)
     
 
  0.861
Si030105m
Uncharacterized protein (393 aa)
     
 
  0.858
Si001620m
Uncharacterized protein (416 aa)
     
  0.813
Si032841m
Uncharacterized protein (136 aa)
       
  0.795
Si031449m
Uncharacterized protein (141 aa)
       
  0.795
Si004808m
Uncharacterized protein (360 aa)
       
  0.762
Si037173m
Derlin ; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (249 aa)
       
  0.732
Si022390m
Derlin ; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (372 aa)
       
  0.732
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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