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Si031616m Si031616m Si034383m Si034383m Si013290m Si013290m Si021152m Si021152m Si038560m Si038560m Si013211m Si013211m Si030064m Si030064m Si037298m Si037298m Si026000m Si026000m Si011090m Si011090m Si029774m Si029774m
"Si013211m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si013211mUncharacterized protein (940 aa)    
Predicted Functional Partners:
Si031616m
Ubiquitin-related modifier 1 homolog ; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2- thiolation reaction by being thiocarboxylated (-COSH) at its C- terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress s [...] (100 aa)
       
      0.542
Si011090m
Uncharacterized protein (199 aa)
       
      0.542
Si038560m
Uncharacterized protein (340 aa)
     
      0.531
Si037298m
Uncharacterized protein (234 aa)
     
      0.531
Si029774m
Uncharacterized protein (462 aa)
     
   
  0.497
Si021152m
Uncharacterized protein (904 aa)
     
 
  0.474
Si034383m
Uncharacterized protein (753 aa)
     
 
  0.472
Si030064m
Uncharacterized protein (401 aa)
     
 
  0.472
Si026000m
Uncharacterized protein (791 aa)
     
 
  0.472
Si013290m
Uncharacterized protein (775 aa)
     
 
  0.472
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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