Full Link:
STRINGSTRING
Si009984m Si009984m Si029482m Si029482m Si038737m Si038737m Si036924m Si036924m Si013348m Si013348m Si021935m Si021935m Si017050m Si017050m Si009981m Si009981m Si010532m Si010532m Si016884m Si016884m Si016817m Si016817m
"Si013348m" - Phenylalanine ammonia-lyase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si013348mPhenylalanine ammonia-lyase (698 aa)    
Predicted Functional Partners:
Si036924m
Uncharacterized protein (283 aa)
 
   
  0.661
Si038737m
Uncharacterized protein (325 aa)
 
   
  0.657
Si010532m
Uncharacterized protein (340 aa)
   
 
  0.633
Si021935m
Uncharacterized protein (475 aa)
   
 
  0.530
Si016817m
Uncharacterized protein (551 aa)
   
 
  0.494
Si029482m
Aldehyde dehydrogenase (526 aa)
           
  0.460
Si017050m
Aldehyde dehydrogenase (485 aa)
           
  0.460
Si016884m
Aldehyde dehydrogenase (528 aa)
           
  0.460
Si009984m
Aldehyde dehydrogenase (481 aa)
           
  0.460
Si009981m
Aldehyde dehydrogenase (482 aa)
           
  0.460
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
Server load: low (2%)