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Si033837m Si033837m Si026349m Si026349m ACC-R ACC-R Si001484m Si001484m Si013525m Si013525m ABH1 ABH1 Si013835m Si013835m Si013345m Si013345m Si001335m Si001335m
"Si013525m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si013525mUncharacterized protein (541 aa)    
Predicted Functional Partners:
Si033837m
Uncharacterized protein (2266 aa)
       
      0.677
ACC-R
Acetyl-coenzyme A carboxylase (2321 aa)
       
      0.677
Si013345m
Uncharacterized protein (699 aa)
     
      0.545
Si013835m
Uncharacterized protein (411 aa)
       
      0.531
ABH1
Nuclear cap-binding protein subunit 1 (887 aa)
     
  0.489
Si001335m
Uncharacterized protein (465 aa)
       
0.454
Si026349m
Mannose-6-phosphate isomerase (455 aa)
       
      0.439
Si001484m
Mannose-6-phosphate isomerase (440 aa)
       
      0.439
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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