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Si006183m Si006183m Si029116m Si029116m Si013612m Si013612m Si035903m Si035903m Si017050m Si017050m Si000006m Si000006m Si000614m Si000614m Si016807m Si016807m Si010235m Si010235m Si009981m Si009981m Si009984m Si009984m
"Si013612m" - Glutamate decarboxylase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si013612mGlutamate decarboxylase (498 aa)    
Predicted Functional Partners:
Si000006m
Uncharacterized protein (2163 aa)
         
  0.944
Si017050m
Aldehyde dehydrogenase (485 aa)
     
  0.932
Si009984m
Aldehyde dehydrogenase (481 aa)
     
  0.932
Si009981m
Aldehyde dehydrogenase (482 aa)
     
  0.932
Si035903m
Glutamate dehydrogenase (411 aa)
     
 
  0.930
Si010235m
Glutamate dehydrogenase (411 aa)
     
 
  0.930
Si000614m
Uncharacterized protein (650 aa)
     
 
  0.930
Si016807m
Uncharacterized protein (555 aa)
     
  0.928
Si006183m
Uncharacterized protein (549 aa)
     
  0.928
Si029116m
Uncharacterized protein (684 aa)
     
  0.927
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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