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Si029774m Si029774m Si016694m Si016694m Si028703m Si028703m Si035645m Si035645m Si029922m Si029922m Si039666m Si039666m Si013779m Si013779m Si035650m Si035650m Si035912m Si035912m Si029902m Si029902m Si029118m Si029118m
"Si013779m" - Patatin in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si013779mPatatin ; Lipolytic acyl hydrolase (LAH) (433 aa)    
Predicted Functional Partners:
Si028703m
Patatin ; Lipolytic acyl hydrolase (LAH) (1311 aa)
           
  0.434
Si039666m
Uncharacterized protein (428 aa)
           
  0.410
Si035912m
Uncharacterized protein (410 aa)
           
  0.410
Si035650m
Uncharacterized protein (452 aa)
           
  0.410
Si035645m
Uncharacterized protein (452 aa)
           
  0.410
Si029922m
Uncharacterized protein (428 aa)
           
  0.410
Si029902m
Uncharacterized protein (433 aa)
           
  0.410
Si029774m
Uncharacterized protein (462 aa)
           
  0.410
Si029118m
Uncharacterized protein (684 aa)
           
  0.410
Si016694m
Uncharacterized protein (603 aa)
           
  0.410
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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